Cluster: Rep_1102_CGC54
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1102
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1102_c_33 | Rep_1102_c_33_16 | 22199 | 23647 | - | 2.A.1.3.22 |
| TC | Rep_1102_c_33 | Rep_1102_c_33_17 | 23700 | 24512 | - | 3.A.1.33.1 |
| TC | Rep_1102_c_33 | Rep_1102_c_33_18 | 24496 | 25344 | - | 3.A.1.26.7 |
| pfam | Rep_1102_c_33 | Rep_1102_c_33_19 | 25357 | 26121 | - | CbiQ |
| TC | Rep_1102_c_33 | Rep_1102_c_33_20 | 26135 | 26761 | - | 3.A.1.28.1 |
| TF | Rep_1102_c_33 | Rep_1102_c_33_21 | 26979 | 28877 | + | LacI |
| CAZyme | Rep_1102_c_33 | Rep_1102_c_33_22 | 29384 | 30226 | - | CBM50 |
Gene ID: Rep_1102_c_33_16
Type: TC
Location: 22199 - 23647 (-)
Type: TC
Location: 22199 - 23647 (-)
Gene ID: Rep_1102_c_33_17
Type: TC
Location: 23700 - 24512 (-)
Type: TC
Location: 23700 - 24512 (-)
Gene ID: Rep_1102_c_33_18
Type: TC
Location: 24496 - 25344 (-)
Type: TC
Location: 24496 - 25344 (-)
Gene ID: Rep_1102_c_33_19
Type: pfam
Location: 25357 - 26121 (-)
Type: pfam
Location: 25357 - 26121 (-)
Gene ID: Rep_1102_c_33_20
Type: TC
Location: 26135 - 26761 (-)
Type: TC
Location: 26135 - 26761 (-)
Gene ID: Rep_1102_c_33_21
Type: TF
Location: 26979 - 28877 (+)
Type: TF
Location: 26979 - 28877 (+)
Gene ID: Rep_1102_c_33_22
Type: CAZyme
Location: 29384 - 30226 (-)
Type: CAZyme
Location: 29384 - 30226 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.