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Cluster: Rep_1102_CGC52

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1102_c_31 Rep_1102_c_31_1 63 1949 + 9.B.97.5.1
NULL(UNKNOWN) Rep_1102_c_31 Rep_1102_c_31_2 2243 2437 - NULL(UNKNOWN)
[View Structural Homologs]
TF Rep_1102_c_31 Rep_1102_c_31_3 2621 3334 - GntR
TC Rep_1102_c_31 Rep_1102_c_31_4 3614 3946 + 4.A.3.2.2
TC Rep_1102_c_31 Rep_1102_c_31_5 3950 5392 + 4.A.3.2.9
CAZyme Rep_1102_c_31 Rep_1102_c_31_6 5490 6932 + GH1
TC Rep_1102_c_31 Rep_1102_c_31_7 6945 7271 + 4.A.3.2.6
Gene ID: Rep_1102_c_31_1
Type: TC
Location: 63 - 1949 (+)
Gene ID: Rep_1102_c_31_2
Type:
Location: 2243 - 2437 (-)
Gene ID: Rep_1102_c_31_3
Type: TF
Location: 2621 - 3334 (-)
Gene ID: Rep_1102_c_31_4
Type: TC
Location: 3614 - 3946 (+)
Gene ID: Rep_1102_c_31_5
Type: TC
Location: 3950 - 5392 (+)
Gene ID: Rep_1102_c_31_6
Type: CAZyme
Location: 5490 - 6932 (+)
Gene ID: Rep_1102_c_31_7
Type: TC
Location: 6945 - 7271 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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