Cluster: Rep_1102_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1102
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1102_c_1 | Rep_1102_c_1_143 | 145045 | 146007 | + | 9.B.146.1.6 |
| pfam | Rep_1102_c_1 | Rep_1102_c_1_144 | 146022 | 147386 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| CAZyme | Rep_1102_c_1 | Rep_1102_c_1_145 | 147396 | 148487 | + | GT28 |
Gene ID: Rep_1102_c_1_143
Type: TC
Location: 145045 - 146007 (+)
Type: TC
Location: 145045 - 146007 (+)
Gene ID: Rep_1102_c_1_144
Type: pfam
Location: 146022 - 147386 (+)
Type: pfam
Location: 146022 - 147386 (+)
Gene ID: Rep_1102_c_1_145
Type: CAZyme
Location: 147396 - 148487 (+)
Type: CAZyme
Location: 147396 - 148487 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.