Cluster: Rep_1102_CGC47
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1102
- CGC Family ID: CGCFAM_00131
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1102_c_21 | Rep_1102_c_21_54 | 51403 | 51867 | - | 4.A.1.1.13 |
| NULL(UNKNOWN) | Rep_1102_c_21 | Rep_1102_c_21_55 | 51870 | 52322 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | Rep_1102_c_21 | Rep_1102_c_21_56 | 52360 | 53139 | - | HTH_6 |
| CAZyme | Rep_1102_c_21 | Rep_1102_c_21_57 | 53204 | 54535 | - | GH4 |
| TC | Rep_1102_c_21 | Rep_1102_c_21_58 | 54555 | 56144 | - | 4.A.1.1.8 |
Gene ID: Rep_1102_c_21_54
Type: TC
Location: 51403 - 51867 (-)
Type: TC
Location: 51403 - 51867 (-)
Gene ID: Rep_1102_c_21_55
Type:
Location: 51870 - 52322 (-)
Type:
Location: 51870 - 52322 (-)
Gene ID: Rep_1102_c_21_56
Type: TF
Location: 52360 - 53139 (-)
Type: TF
Location: 52360 - 53139 (-)
Gene ID: Rep_1102_c_21_57
Type: CAZyme
Location: 53204 - 54535 (-)
Type: CAZyme
Location: 53204 - 54535 (-)
Gene ID: Rep_1102_c_21_58
Type: TC
Location: 54555 - 56144 (-)
Type: TC
Location: 54555 - 56144 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.