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Cluster: Rep_1102_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1102_c_21 Rep_1102_c_21_1 142 762 - 2.A.115.2.15
TF Rep_1102_c_21 Rep_1102_c_21_2 755 2650 - HTH_11 | Mga
CAZyme Rep_1102_c_21 Rep_1102_c_21_3 2705 4147 - GH1
pfam Rep_1102_c_21 Rep_1102_c_21_4 4216 4557 - PTS_IIA
TC Rep_1102_c_21 Rep_1102_c_21_5 4596 5861 - 4.A.3.1.3
TC Rep_1102_c_21 Rep_1102_c_21_6 5865 6188 - 4.A.3.2.3
TC Rep_1102_c_21 Rep_1102_c_21_7 6323 8983 - 3.A.3.2.41
Gene ID: Rep_1102_c_21_1
Type: TC
Location: 142 - 762 (-)
Gene ID: Rep_1102_c_21_2
Type: TF
Location: 755 - 2650 (-)
Gene ID: Rep_1102_c_21_3
Type: CAZyme
Location: 2705 - 4147 (-)
Gene ID: Rep_1102_c_21_4
Type: pfam
Location: 4216 - 4557 (-)
Gene ID: Rep_1102_c_21_5
Type: TC
Location: 4596 - 5861 (-)
Gene ID: Rep_1102_c_21_6
Type: TC
Location: 5865 - 6188 (-)
Gene ID: Rep_1102_c_21_7
Type: TC
Location: 6323 - 8983 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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