Cluster: Rep_1102_CGC42
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1102
- CGC Family ID: CGCFAM_00508
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1102_c_18 | Rep_1102_c_18_58 | 58864 | 61002 | - | GH65 |
| TC | Rep_1102_c_18 | Rep_1102_c_18_59 | 61057 | 62484 | - | 4.A.1.2.3 |
| CAZyme | Rep_1102_c_18 | Rep_1102_c_18_60 | 62500 | 63933 | - | GH1 |
| TF | Rep_1102_c_18 | Rep_1102_c_18_61 | 64111 | 64962 | - | HTH_AraC | HTH_AraC |
| TC | Rep_1102_c_18 | Rep_1102_c_18_62 | 65115 | 65465 | - | 1.A.1.21.1 |
Gene ID: Rep_1102_c_18_58
Type: CAZyme
Location: 58864 - 61002 (-)
Type: CAZyme
Location: 58864 - 61002 (-)
Gene ID: Rep_1102_c_18_59
Type: TC
Location: 61057 - 62484 (-)
Type: TC
Location: 61057 - 62484 (-)
Gene ID: Rep_1102_c_18_60
Type: CAZyme
Location: 62500 - 63933 (-)
Type: CAZyme
Location: 62500 - 63933 (-)
Gene ID: Rep_1102_c_18_61
Type: TF
Location: 64111 - 64962 (-)
Type: TF
Location: 64111 - 64962 (-)
Gene ID: Rep_1102_c_18_62
Type: TC
Location: 65115 - 65465 (-)
Type: TC
Location: 65115 - 65465 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.