Cluster: Rep_1102_CGC40
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1102
- CGC Family ID: CGCFAM_02811
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1102_c_18 | Rep_1102_c_18_8 | 6464 | 7789 | + | 9.B.14.1.13 |
| TF | Rep_1102_c_18 | Rep_1102_c_18_9 | 7786 | 8541 | + | LytTR |
| CAZyme | Rep_1102_c_18 | Rep_1102_c_18_10 | 8587 | 9165 | - | AA10 |
Gene ID: Rep_1102_c_18_8
Type: TC
Location: 6464 - 7789 (+)
Type: TC
Location: 6464 - 7789 (+)
Gene ID: Rep_1102_c_18_9
Type: TF
Location: 7786 - 8541 (+)
Type: TF
Location: 7786 - 8541 (+)
Gene ID: Rep_1102_c_18_10
Type: CAZyme
Location: 8587 - 9165 (-)
Type: CAZyme
Location: 8587 - 9165 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.