Cluster: Rep_1102_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1102
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1102_c_0 | Rep_1102_c_0_311 | 317410 | 318759 | + | 2.A.3.8.12 |
| CAZyme | Rep_1102_c_0 | Rep_1102_c_0_312 | 318956 | 320389 | + | GH1 |
| TC | Rep_1102_c_0 | Rep_1102_c_0_313 | 320449 | 320766 | + | 4.A.3.2.6 |
| TF | Rep_1102_c_0 | Rep_1102_c_0_314 | 320779 | 322797 | + | HTH_11 | Mga |
| TC | Rep_1102_c_0 | Rep_1102_c_0_315 | 322810 | 323127 | + | 4.A.3.2.2 |
| NULL(UNKNOWN) | Rep_1102_c_0 | Rep_1102_c_0_316 | 323777 | 324286 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1102_c_0 | Rep_1102_c_0_317 | 324301 | 325674 | + | 4.A.3.2.3 |
Gene ID: Rep_1102_c_0_311
Type: TC
Location: 317410 - 318759 (+)
Type: TC
Location: 317410 - 318759 (+)
Gene ID: Rep_1102_c_0_312
Type: CAZyme
Location: 318956 - 320389 (+)
Type: CAZyme
Location: 318956 - 320389 (+)
Gene ID: Rep_1102_c_0_313
Type: TC
Location: 320449 - 320766 (+)
Type: TC
Location: 320449 - 320766 (+)
Gene ID: Rep_1102_c_0_314
Type: TF
Location: 320779 - 322797 (+)
Type: TF
Location: 320779 - 322797 (+)
Gene ID: Rep_1102_c_0_315
Type: TC
Location: 322810 - 323127 (+)
Type: TC
Location: 322810 - 323127 (+)
Gene ID: Rep_1102_c_0_316
Type:
Location: 323777 - 324286 (+)
Type:
Location: 323777 - 324286 (+)
Gene ID: Rep_1102_c_0_317
Type: TC
Location: 324301 - 325674 (+)
Type: TC
Location: 324301 - 325674 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.