Cluster: Rep_1102_CGC37
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1102
- CGC Family ID: CGCFAM_01564
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1102_c_15 | Rep_1102_c_15_94 | 94362 | 95600 | + | 3.A.1.19.4 |
| pfam | Rep_1102_c_15 | Rep_1102_c_15_95 | 95593 | 96450 | + | BPD_transp_1 |
| pfam | Rep_1102_c_15 | Rep_1102_c_15_96 | 96444 | 97238 | + | BPD_transp_1 |
| TC | Rep_1102_c_15 | Rep_1102_c_15_97 | 97222 | 98217 | + | 3.A.1.11.8 |
| CAZyme | Rep_1102_c_15 | Rep_1102_c_15_98 | 98214 | 98894 | + | GT2 |
Gene ID: Rep_1102_c_15_94
Type: TC
Location: 94362 - 95600 (+)
Type: TC
Location: 94362 - 95600 (+)
Gene ID: Rep_1102_c_15_95
Type: pfam
Location: 95593 - 96450 (+)
Type: pfam
Location: 95593 - 96450 (+)
Gene ID: Rep_1102_c_15_96
Type: pfam
Location: 96444 - 97238 (+)
Type: pfam
Location: 96444 - 97238 (+)
Gene ID: Rep_1102_c_15_97
Type: TC
Location: 97222 - 98217 (+)
Type: TC
Location: 97222 - 98217 (+)
Gene ID: Rep_1102_c_15_98
Type: CAZyme
Location: 98214 - 98894 (+)
Type: CAZyme
Location: 98214 - 98894 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.