Cluster: Rep_1102_CGC34
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1102
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1102_c_13 | Rep_1102_c_13_58 | 62253 | 63827 | + | 2.A.49.5.5 |
| CAZyme | Rep_1102_c_13 | Rep_1102_c_13_59 | 63836 | 65296 | - | GH13_5 |
| TF | Rep_1102_c_13 | Rep_1102_c_13_60 | 65454 | 66206 | + | HTH_DeoR |
| STP | Rep_1102_c_13 | Rep_1102_c_13_61 | 66203 | 67123 | + | PfkB |
| TC | Rep_1102_c_13 | Rep_1102_c_13_62 | 67176 | 69098 | + | 4.A.2.1.20 |
Gene ID: Rep_1102_c_13_58
Type: TC
Location: 62253 - 63827 (+)
Type: TC
Location: 62253 - 63827 (+)
Gene ID: Rep_1102_c_13_59
Type: CAZyme
Location: 63836 - 65296 (-)
Type: CAZyme
Location: 63836 - 65296 (-)
Gene ID: Rep_1102_c_13_60
Type: TF
Location: 65454 - 66206 (+)
Type: TF
Location: 65454 - 66206 (+)
Gene ID: Rep_1102_c_13_61
Type: STP
Location: 66203 - 67123 (+)
Type: STP
Location: 66203 - 67123 (+)
Gene ID: Rep_1102_c_13_62
Type: TC
Location: 67176 - 69098 (+)
Type: TC
Location: 67176 - 69098 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.