Cluster: Rep_1102_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1102
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1102_c_12 | Rep_1102_c_12_110 | 114795 | 116165 | + | 1.A.26.1.3 |
| STP | Rep_1102_c_12 | Rep_1102_c_12_111 | 116207 | 116647 | + | NUDIX |
| TF | Rep_1102_c_12 | Rep_1102_c_12_112 | 116669 | 117469 | - | HTH_6 |
| CAZyme | Rep_1102_c_12 | Rep_1102_c_12_113 | 117628 | 119076 | + | GH1 |
| TC | Rep_1102_c_12 | Rep_1102_c_12_114 | 119140 | 119775 | - | 9.B.158.1.3 |
Gene ID: Rep_1102_c_12_110
Type: TC
Location: 114795 - 116165 (+)
Type: TC
Location: 114795 - 116165 (+)
Gene ID: Rep_1102_c_12_111
Type: STP
Location: 116207 - 116647 (+)
Type: STP
Location: 116207 - 116647 (+)
Gene ID: Rep_1102_c_12_112
Type: TF
Location: 116669 - 117469 (-)
Type: TF
Location: 116669 - 117469 (-)
Gene ID: Rep_1102_c_12_113
Type: CAZyme
Location: 117628 - 119076 (+)
Type: CAZyme
Location: 117628 - 119076 (+)
Gene ID: Rep_1102_c_12_114
Type: TC
Location: 119140 - 119775 (-)
Type: TC
Location: 119140 - 119775 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.