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Cluster: Rep_1102_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1102_c_12 Rep_1102_c_12_7 5548 7293 + 2.A.114.1.3
NULL(UNKNOWN) Rep_1102_c_12 Rep_1102_c_12_8 7347 7577 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1102_c_12 Rep_1102_c_12_9 7656 8975 - 2.A.1.2.20
pfam Rep_1102_c_12 Rep_1102_c_12_10 9145 9516 + DUF1033
TC Rep_1102_c_12 Rep_1102_c_12_11 9455 11530 + 3.A.7.7.1
TF Rep_1102_c_12 Rep_1102_c_12_12 11736 14414 + TrmB
TC Rep_1102_c_12 Rep_1102_c_12_13 14534 14851 + 4.A.3.2.4
TC Rep_1102_c_12 Rep_1102_c_12_14 14875 15204 + 4.A.3.2.9
pfam Rep_1102_c_12 Rep_1102_c_12_15 15218 16360 + Acetyltransf_9 | SCP2_2 | Acetyltransf_17
TC Rep_1102_c_12 Rep_1102_c_12_16 16379 17632 + 4.A.3.2.2
CAZyme Rep_1102_c_12 Rep_1102_c_12_17 17716 19104 + GH1
CAZyme Rep_1102_c_12 Rep_1102_c_12_18 19125 20216 + GH170
TC Rep_1102_c_12 Rep_1102_c_12_19 21001 21642 + 3.A.1.3.12
TC Rep_1102_c_12 Rep_1102_c_12_20 21656 22291 + 3.A.1.3.2
TC Rep_1102_c_12 Rep_1102_c_12_21 22315 23142 + 3.A.1.3.15
TC Rep_1102_c_12 Rep_1102_c_12_22 23261 25663 + 3.A.12.1.1
TF Rep_1102_c_12 Rep_1102_c_12_23 25971 27917 + HTH_11 | HTH_11
TC Rep_1102_c_12 Rep_1102_c_12_24 27921 28382 + 4.A.2.1.6
TC Rep_1102_c_12 Rep_1102_c_12_25 28427 28738 + 4.A.2.1.10
TC Rep_1102_c_12 Rep_1102_c_12_26 28750 29841 + 4.A.2.1.10
Gene ID: Rep_1102_c_12_7
Type: TC
Location: 5548 - 7293 (+)
Gene ID: Rep_1102_c_12_8
Type:
Location: 7347 - 7577 (-)
Gene ID: Rep_1102_c_12_9
Type: TC
Location: 7656 - 8975 (-)
Gene ID: Rep_1102_c_12_10
Type: pfam
Location: 9145 - 9516 (+)
Gene ID: Rep_1102_c_12_11
Type: TC
Location: 9455 - 11530 (+)
Gene ID: Rep_1102_c_12_12
Type: TF
Location: 11736 - 14414 (+)
Gene ID: Rep_1102_c_12_13
Type: TC
Location: 14534 - 14851 (+)
Gene ID: Rep_1102_c_12_14
Type: TC
Location: 14875 - 15204 (+)
Gene ID: Rep_1102_c_12_15
Type: pfam
Location: 15218 - 16360 (+)
Gene ID: Rep_1102_c_12_16
Type: TC
Location: 16379 - 17632 (+)
Gene ID: Rep_1102_c_12_17
Type: CAZyme
Location: 17716 - 19104 (+)
Gene ID: Rep_1102_c_12_18
Type: CAZyme
Location: 19125 - 20216 (+)
Gene ID: Rep_1102_c_12_19
Type: TC
Location: 21001 - 21642 (+)
Gene ID: Rep_1102_c_12_20
Type: TC
Location: 21656 - 22291 (+)
Gene ID: Rep_1102_c_12_21
Type: TC
Location: 22315 - 23142 (+)
Gene ID: Rep_1102_c_12_22
Type: TC
Location: 23261 - 25663 (+)
Gene ID: Rep_1102_c_12_23
Type: TF
Location: 25971 - 27917 (+)
Gene ID: Rep_1102_c_12_24
Type: TC
Location: 27921 - 28382 (+)
Gene ID: Rep_1102_c_12_25
Type: TC
Location: 28427 - 28738 (+)
Gene ID: Rep_1102_c_12_26
Type: TC
Location: 28750 - 29841 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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