Cluster: Rep_1102_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1102
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1102_c_10 | Rep_1102_c_10_10 | 13770 | 15407 | + | 2.A.66.2.14 |
| pfam | Rep_1102_c_10 | Rep_1102_c_10_11 | 15824 | 16483 | + | LysM |
| pfam | Rep_1102_c_10 | Rep_1102_c_10_12 | 16584 | 17435 | - | PseudoU_synth_2 |
| CAZyme | Rep_1102_c_10 | Rep_1102_c_10_13 | 17736 | 19937 | + | GT51 |
Gene ID: Rep_1102_c_10_10
Type: TC
Location: 13770 - 15407 (+)
Type: TC
Location: 13770 - 15407 (+)
Gene ID: Rep_1102_c_10_11
Type: pfam
Location: 15824 - 16483 (+)
Type: pfam
Location: 15824 - 16483 (+)
Gene ID: Rep_1102_c_10_12
Type: pfam
Location: 16584 - 17435 (-)
Type: pfam
Location: 16584 - 17435 (-)
Gene ID: Rep_1102_c_10_13
Type: CAZyme
Location: 17736 - 19937 (+)
Type: CAZyme
Location: 17736 - 19937 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.