Cluster: Rep_1102_CGC24
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1102
- CGC Family ID: CGCFAM_02932
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1102_c_6 | Rep_1102_c_6_124 | 126400 | 127701 | + | 4.A.3.2.2 |
| NULL(UNKNOWN) | Rep_1102_c_6 | Rep_1102_c_6_125 | 127717 | 128175 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1102_c_6 | Rep_1102_c_6_126 | 128172 | 130406 | + | GH36 |
| pfam | Rep_1102_c_6 | Rep_1102_c_6_127 | 130640 | 131506 | + | ROK |
| CAZyme | Rep_1102_c_6 | Rep_1102_c_6_128 | 131510 | 132946 | + | GH1 |
| TC | Rep_1102_c_6 | Rep_1102_c_6_129 | 132952 | 133266 | + | 4.A.3.2.4 |
| TC | Rep_1102_c_6 | Rep_1102_c_6_130 | 133280 | 133591 | + | 4.A.3.2.2 |
Gene ID: Rep_1102_c_6_124
Type: TC
Location: 126400 - 127701 (+)
Type: TC
Location: 126400 - 127701 (+)
Gene ID: Rep_1102_c_6_125
Type:
Location: 127717 - 128175 (+)
Type:
Location: 127717 - 128175 (+)
Gene ID: Rep_1102_c_6_126
Type: CAZyme
Location: 128172 - 130406 (+)
Type: CAZyme
Location: 128172 - 130406 (+)
Gene ID: Rep_1102_c_6_127
Type: pfam
Location: 130640 - 131506 (+)
Type: pfam
Location: 130640 - 131506 (+)
Gene ID: Rep_1102_c_6_128
Type: CAZyme
Location: 131510 - 132946 (+)
Type: CAZyme
Location: 131510 - 132946 (+)
Gene ID: Rep_1102_c_6_129
Type: TC
Location: 132952 - 133266 (+)
Type: TC
Location: 132952 - 133266 (+)
Gene ID: Rep_1102_c_6_130
Type: TC
Location: 133280 - 133591 (+)
Type: TC
Location: 133280 - 133591 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.