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Cluster: Rep_1102_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1102_c_6 Rep_1102_c_6_91 92515 93936 + 2.A.3.7.7
pfam Rep_1102_c_6 Rep_1102_c_6_92 93890 94987 + PAD_porph
pfam Rep_1102_c_6 Rep_1102_c_6_93 94997 95926 + AA_kinase
TC Rep_1102_c_6 Rep_1102_c_6_94 96092 97426 + 4.A.3.2.9
CAZyme Rep_1102_c_6 Rep_1102_c_6_95 97419 99716 + GH3
TF Rep_1102_c_6 Rep_1102_c_6_96 99780 100742 + LacI
CAZyme Rep_1102_c_6 Rep_1102_c_6_97 100865 102259 + GH1
NULL(UNKNOWN) Rep_1102_c_6 Rep_1102_c_6_98 102318 102752 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1102_c_6 Rep_1102_c_6_99 102817 105384 - GT51
Gene ID: Rep_1102_c_6_91
Type: TC
Location: 92515 - 93936 (+)
Gene ID: Rep_1102_c_6_92
Type: pfam
Location: 93890 - 94987 (+)
Gene ID: Rep_1102_c_6_93
Type: pfam
Location: 94997 - 95926 (+)
Gene ID: Rep_1102_c_6_94
Type: TC
Location: 96092 - 97426 (+)
Gene ID: Rep_1102_c_6_95
Type: CAZyme
Location: 97419 - 99716 (+)
Gene ID: Rep_1102_c_6_96
Type: TF
Location: 99780 - 100742 (+)
Gene ID: Rep_1102_c_6_97
Type: CAZyme
Location: 100865 - 102259 (+)
Gene ID: Rep_1102_c_6_98
Type:
Location: 102318 - 102752 (-)
Gene ID: Rep_1102_c_6_99
Type: CAZyme
Location: 102817 - 105384 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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