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Cluster: Rep_1102_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1102_c_6 Rep_1102_c_6_70 65684 67177 - 3.A.1.121.3
CAZyme Rep_1102_c_6 Rep_1102_c_6_71 67822 69570 + CBM34 | GH13_20
pfam Rep_1102_c_6 Rep_1102_c_6_72 69646 70017 + DUF1304
pfam Rep_1102_c_6 Rep_1102_c_6_73 70126 70626 + DUF1456 | DUF1456
TC Rep_1102_c_6 Rep_1102_c_6_74 70816 73434 + 8.A.7.1.5
peptidase Rep_1102_c_6 Rep_1102_c_6_75 74054 75472 + M20.UPA
TC Rep_1102_c_6 Rep_1102_c_6_76 75558 77477 + 2.A.67.4.2
Gene ID: Rep_1102_c_6_70
Type: TC
Location: 65684 - 67177 (-)
Gene ID: Rep_1102_c_6_71
Type: CAZyme
Location: 67822 - 69570 (+)
Gene ID: Rep_1102_c_6_72
Type: pfam
Location: 69646 - 70017 (+)
Gene ID: Rep_1102_c_6_73
Type: pfam
Location: 70126 - 70626 (+)
Gene ID: Rep_1102_c_6_74
Type: TC
Location: 70816 - 73434 (+)
Gene ID: Rep_1102_c_6_75
Type: peptidase
Location: 74054 - 75472 (+)
Gene ID: Rep_1102_c_6_76
Type: TC
Location: 75558 - 77477 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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