Cluster: Rep_1102_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1102
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1102_c_5 | Rep_1102_c_5_141 | 133600 | 134862 | + | 2.A.1.5.2 |
| CAZyme | Rep_1102_c_5 | Rep_1102_c_5_142 | 134877 | 135848 | + | GH43_26 |
| pfam | Rep_1102_c_5 | Rep_1102_c_5_143 | 136077 | 138053 | + | UvrD-helicase | AAA_19 |
| TF | Rep_1102_c_5 | Rep_1102_c_5_144 | 138064 | 138813 | + | MerR | MerR |
| CAZyme | Rep_1102_c_5 | Rep_1102_c_5_145 | 139002 | 140426 | + | GH1 |
Gene ID: Rep_1102_c_5_141
Type: TC
Location: 133600 - 134862 (+)
Type: TC
Location: 133600 - 134862 (+)
Gene ID: Rep_1102_c_5_142
Type: CAZyme
Location: 134877 - 135848 (+)
Type: CAZyme
Location: 134877 - 135848 (+)
Gene ID: Rep_1102_c_5_143
Type: pfam
Location: 136077 - 138053 (+)
Type: pfam
Location: 136077 - 138053 (+)
Gene ID: Rep_1102_c_5_144
Type: TF
Location: 138064 - 138813 (+)
Type: TF
Location: 138064 - 138813 (+)
Gene ID: Rep_1102_c_5_145
Type: CAZyme
Location: 139002 - 140426 (+)
Type: CAZyme
Location: 139002 - 140426 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.