Cluster: Rep_1102_CGC17
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_1102
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1102_c_5 | Rep_1102_c_5_27 | 24197 | 25141 | + | 9.B.211.1.2 |
| peptidase | Rep_1102_c_5 | Rep_1102_c_5_28 | 25167 | 25811 | + | C15.UPW |
| TC | Rep_1102_c_5 | Rep_1102_c_5_29 | 25971 | 28586 | + | 3.A.23.1.1 |
| pfam | Rep_1102_c_5 | Rep_1102_c_5_30 | 28730 | 29152 | + | EIIA-man |
| TC | Rep_1102_c_5 | Rep_1102_c_5_31 | 29164 | 29658 | + | 4.A.6.1.19 |
| TC | Rep_1102_c_5 | Rep_1102_c_5_32 | 29680 | 30492 | + | 4.A.6.1.19 |
| TC | Rep_1102_c_5 | Rep_1102_c_5_33 | 30489 | 31310 | + | 4.A.6.1.19 |
| NULL(UNKNOWN) | Rep_1102_c_5 | Rep_1102_c_5_34 | 31358 | 33445 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1102_c_5 | Rep_1102_c_5_35 | 33442 | 34560 | + | GH172 |
| pfam | Rep_1102_c_5 | Rep_1102_c_5_36 | 34606 | 35487 | + | ROK |
| pfam | Rep_1102_c_5 | Rep_1102_c_5_37 | 35876 | 36721 | + | PRD | PRD | CAT_RBD |
| TC | Rep_1102_c_5 | Rep_1102_c_5_38 | 36718 | 38583 | + | 4.A.1.2.11 |
| CAZyme | Rep_1102_c_5 | Rep_1102_c_5_39 | 38594 | 40027 | + | GH1 |
| NULL(UNKNOWN) | Rep_1102_c_5 | Rep_1102_c_5_40 | 39979 | 40233 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_1102_c_5 | Rep_1102_c_5_41 | 40639 | 40860 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1102_c_5 | Rep_1102_c_5_42 | 41040 | 43469 | + | GH39 |
| TC | Rep_1102_c_5 | Rep_1102_c_5_43 | 43632 | 45026 | + | 2.A.2.3.3 |
| CAZyme | Rep_1102_c_5 | Rep_1102_c_5_44 | 45217 | 46311 | + | GH179 |
Gene ID: Rep_1102_c_5_27
Type: TC
Location: 24197 - 25141 (+)
Type: TC
Location: 24197 - 25141 (+)
Gene ID: Rep_1102_c_5_28
Type: peptidase
Location: 25167 - 25811 (+)
Type: peptidase
Location: 25167 - 25811 (+)
Gene ID: Rep_1102_c_5_29
Type: TC
Location: 25971 - 28586 (+)
Type: TC
Location: 25971 - 28586 (+)
Gene ID: Rep_1102_c_5_30
Type: pfam
Location: 28730 - 29152 (+)
Type: pfam
Location: 28730 - 29152 (+)
Gene ID: Rep_1102_c_5_31
Type: TC
Location: 29164 - 29658 (+)
Type: TC
Location: 29164 - 29658 (+)
Gene ID: Rep_1102_c_5_32
Type: TC
Location: 29680 - 30492 (+)
Type: TC
Location: 29680 - 30492 (+)
Gene ID: Rep_1102_c_5_33
Type: TC
Location: 30489 - 31310 (+)
Type: TC
Location: 30489 - 31310 (+)
Gene ID: Rep_1102_c_5_34
Type:
Location: 31358 - 33445 (+)
Type:
Location: 31358 - 33445 (+)
Gene ID: Rep_1102_c_5_35
Type: CAZyme
Location: 33442 - 34560 (+)
Type: CAZyme
Location: 33442 - 34560 (+)
Gene ID: Rep_1102_c_5_36
Type: pfam
Location: 34606 - 35487 (+)
Type: pfam
Location: 34606 - 35487 (+)
Gene ID: Rep_1102_c_5_37
Type: pfam
Location: 35876 - 36721 (+)
Type: pfam
Location: 35876 - 36721 (+)
Gene ID: Rep_1102_c_5_38
Type: TC
Location: 36718 - 38583 (+)
Type: TC
Location: 36718 - 38583 (+)
Gene ID: Rep_1102_c_5_39
Type: CAZyme
Location: 38594 - 40027 (+)
Type: CAZyme
Location: 38594 - 40027 (+)
Gene ID: Rep_1102_c_5_40
Type:
Location: 39979 - 40233 (+)
Type:
Location: 39979 - 40233 (+)
Gene ID: Rep_1102_c_5_41
Type:
Location: 40639 - 40860 (+)
Type:
Location: 40639 - 40860 (+)
Gene ID: Rep_1102_c_5_42
Type: CAZyme
Location: 41040 - 43469 (+)
Type: CAZyme
Location: 41040 - 43469 (+)
Gene ID: Rep_1102_c_5_43
Type: TC
Location: 43632 - 45026 (+)
Type: TC
Location: 43632 - 45026 (+)
Gene ID: Rep_1102_c_5_44
Type: CAZyme
Location: 45217 - 46311 (+)
Type: CAZyme
Location: 45217 - 46311 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.