Cluster: Rep_1102_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1102
- CGC Family ID: CGCFAM_02701
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1102_c_4 | Rep_1102_c_4_55 | 51910 | 54297 | + | GT51 |
| pfam | Rep_1102_c_4 | Rep_1102_c_4_56 | 54432 | 54653 | + | Tad2-like |
| pfam | Rep_1102_c_4 | Rep_1102_c_4_57 | 54650 | 55402 | + | adh_short | KR | adh_short_C2 |
| TC | Rep_1102_c_4 | Rep_1102_c_4_58 | 55520 | 56026 | + | 2.A.88.9.1 |
| CAZyme | Rep_1102_c_4 | Rep_1102_c_4_59 | 56060 | 57682 | - | GH13_29 |
| TC | Rep_1102_c_4 | Rep_1102_c_4_60 | 57698 | 59644 | - | 4.A.1.2.13 |
Gene ID: Rep_1102_c_4_55
Type: CAZyme
Location: 51910 - 54297 (+)
Type: CAZyme
Location: 51910 - 54297 (+)
Gene ID: Rep_1102_c_4_56
Type: pfam
Location: 54432 - 54653 (+)
Type: pfam
Location: 54432 - 54653 (+)
Gene ID: Rep_1102_c_4_57
Type: pfam
Location: 54650 - 55402 (+)
Type: pfam
Location: 54650 - 55402 (+)
Gene ID: Rep_1102_c_4_58
Type: TC
Location: 55520 - 56026 (+)
Type: TC
Location: 55520 - 56026 (+)
Gene ID: Rep_1102_c_4_59
Type: CAZyme
Location: 56060 - 57682 (-)
Type: CAZyme
Location: 56060 - 57682 (-)
Gene ID: Rep_1102_c_4_60
Type: TC
Location: 57698 - 59644 (-)
Type: TC
Location: 57698 - 59644 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.