Cluster: Rep_1102_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1102
- CGC Family ID: CGCFAM_00131
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1102_c_3 | Rep_1102_c_3_7 | 7417 | 8742 | - | GH4 |
| TC | Rep_1102_c_3 | Rep_1102_c_3_8 | 8778 | 10358 | - | 4.A.1.1.8 |
| pfam | Rep_1102_c_3 | Rep_1102_c_3_9 | 10394 | 11194 | - | YdjC |
| TF | Rep_1102_c_3 | Rep_1102_c_3_10 | 11350 | 12072 | + | HTH_6 |
| CAZyme | Rep_1102_c_3 | Rep_1102_c_3_11 | 12107 | 13495 | - | GH16_24 |
Gene ID: Rep_1102_c_3_7
Type: CAZyme
Location: 7417 - 8742 (-)
Type: CAZyme
Location: 7417 - 8742 (-)
Gene ID: Rep_1102_c_3_8
Type: TC
Location: 8778 - 10358 (-)
Type: TC
Location: 8778 - 10358 (-)
Gene ID: Rep_1102_c_3_9
Type: pfam
Location: 10394 - 11194 (-)
Type: pfam
Location: 10394 - 11194 (-)
Gene ID: Rep_1102_c_3_10
Type: TF
Location: 11350 - 12072 (+)
Type: TF
Location: 11350 - 12072 (+)
Gene ID: Rep_1102_c_3_11
Type: CAZyme
Location: 12107 - 13495 (-)
Type: CAZyme
Location: 12107 - 13495 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_A
Species
Enterococcus_A raffinosus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.