Cluster: Rep_1097_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1097
- CGC Family ID: CGCFAM_00002
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1097_c_9 | Rep_1097_c_9_34 | 32474 | 33676 | - | GT4 |
| CAZyme | Rep_1097_c_9 | Rep_1097_c_9_35 | 33694 | 34845 | - | GT4 |
| CAZyme | Rep_1097_c_9 | Rep_1097_c_9_36 | 34862 | 35860 | - | GT2 |
| NULL(UNKNOWN) | Rep_1097_c_9 | Rep_1097_c_9_37 | 35884 | 36618 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_1097_c_9 | Rep_1097_c_9_38 | 37050 | 37766 | + | 3.D.7.1.1 |
Gene ID: Rep_1097_c_9_34
Type: CAZyme
Location: 32474 - 33676 (-)
Type: CAZyme
Location: 32474 - 33676 (-)
Gene ID: Rep_1097_c_9_35
Type: CAZyme
Location: 33694 - 34845 (-)
Type: CAZyme
Location: 33694 - 34845 (-)
Gene ID: Rep_1097_c_9_36
Type: CAZyme
Location: 34862 - 35860 (-)
Type: CAZyme
Location: 34862 - 35860 (-)
Gene ID: Rep_1097_c_9_37
Type:
Location: 35884 - 36618 (-)
Type:
Location: 35884 - 36618 (-)
Gene ID: Rep_1097_c_9_38
Type: TC
Location: 37050 - 37766 (+)
Type: TC
Location: 37050 - 37766 (+)
Taxonomic Lineage
Domain
Archaea
Phylum
Methanobacteriota
Class
Methanobacteria
Order
Methanobacteriales
Family
Methanobacteriaceae
Genus
Methanobacterium
Species
Methanobacterium sp000499765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.