Cluster: Rep_1097_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_1097
- CGC Family ID: CGCFAM_00002
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1097_c_8 | Rep_1097_c_8_27 | 19415 | 20680 | - | 2.A.66.2.10 |
| pfam | Rep_1097_c_8 | Rep_1097_c_8_28 | 21370 | 21720 | - | Polysacc_synt |
| CAZyme | Rep_1097_c_8 | Rep_1097_c_8_29 | 22488 | 23720 | - | GT4 |
| pfam | Rep_1097_c_8 | Rep_1097_c_8_30 | 23711 | 25843 | - | DUF1616 | DUF2206 |
| CAZyme | Rep_1097_c_8 | Rep_1097_c_8_31 | 26018 | 27130 | - | GT4 |
| CAZyme | Rep_1097_c_8 | Rep_1097_c_8_32 | 27238 | 28371 | - | GT4 |
| CAZyme | Rep_1097_c_8 | Rep_1097_c_8_33 | 28494 | 29621 | - | GT2 |
Gene ID: Rep_1097_c_8_27
Type: TC
Location: 19415 - 20680 (-)
Type: TC
Location: 19415 - 20680 (-)
Gene ID: Rep_1097_c_8_28
Type: pfam
Location: 21370 - 21720 (-)
Type: pfam
Location: 21370 - 21720 (-)
Gene ID: Rep_1097_c_8_29
Type: CAZyme
Location: 22488 - 23720 (-)
Type: CAZyme
Location: 22488 - 23720 (-)
Gene ID: Rep_1097_c_8_30
Type: pfam
Location: 23711 - 25843 (-)
Type: pfam
Location: 23711 - 25843 (-)
Gene ID: Rep_1097_c_8_31
Type: CAZyme
Location: 26018 - 27130 (-)
Type: CAZyme
Location: 26018 - 27130 (-)
Gene ID: Rep_1097_c_8_32
Type: CAZyme
Location: 27238 - 28371 (-)
Type: CAZyme
Location: 27238 - 28371 (-)
Gene ID: Rep_1097_c_8_33
Type: CAZyme
Location: 28494 - 29621 (-)
Type: CAZyme
Location: 28494 - 29621 (-)
Taxonomic Lineage
Domain
Archaea
Phylum
Methanobacteriota
Class
Methanobacteria
Order
Methanobacteriales
Family
Methanobacteriaceae
Genus
Methanobacterium
Species
Methanobacterium sp000499765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.