Cluster: Rep_1093_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1093
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1093_c_3 | Rep_1093_c_3_8 | 5108 | 5920 | - | 2.A.102.4.1 |
| NULL(UNKNOWN) | Rep_1093_c_3 | Rep_1093_c_3_9 | 5975 | 7057 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1093_c_3 | Rep_1093_c_3_10 | 7094 | 8998 | + | GT2 |
Gene ID: Rep_1093_c_3_8
Type: TC
Location: 5108 - 5920 (-)
Type: TC
Location: 5108 - 5920 (-)
Gene ID: Rep_1093_c_3_9
Type:
Location: 5975 - 7057 (+)
Type:
Location: 5975 - 7057 (+)
Gene ID: Rep_1093_c_3_10
Type: CAZyme
Location: 7094 - 8998 (+)
Type: CAZyme
Location: 7094 - 8998 (+)
Taxonomic Lineage
Domain
Archaea
Phylum
Methanobacteriota
Class
Methanobacteria
Order
Methanobacteriales
Family
Methanobacteriaceae
Genus
Methanobrevibacter_A
Species
Methanobrevibacter_A smithii_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.