dbCAN HGM

Cluster: Rep_1093_CGC1

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_1093_c_0	Rep_1093_c_0_276	279033	280322	+	3.A.18.1.1
TF	Rep_1093_c_0	Rep_1093_c_0_277	280323	281126	-	MarR
pfam	Rep_1093_c_0	Rep_1093_c_0_278	281180	282601	-	DHH \| DHHA1 \| DHH_CID
TC	Rep_1093_c_0	Rep_1093_c_0_279	282598	282867	-	3.A.5.7.1
pfam	Rep_1093_c_0	Rep_1093_c_0_280	282886	283980	-	Amino_oxidase \| GLF \| NAD_binding_8 \| NAD_binding_9
CAZyme	Rep_1093_c_0	Rep_1093_c_0_281	283987	285090	-	GT2
STP	Rep_1093_c_0	Rep_1093_c_0_282	285080	285853	-	HEM4
pfam	Rep_1093_c_0	Rep_1093_c_0_283	286253	287521	+	AAA_14 \| DUF4143
CAZyme	Rep_1093_c_0	Rep_1093_c_0_284	287658	288680	+	GT2

Gene ID: Rep_1093_c_0_276
Type: TC
Location: 279033 - 280322 (+)

Gene ID: Rep_1093_c_0_277
Type: TF
Location: 280323 - 281126 (-)

Gene ID: Rep_1093_c_0_278
Type: pfam
Location: 281180 - 282601 (-)

Gene ID: Rep_1093_c_0_279
Type: TC
Location: 282598 - 282867 (-)

Gene ID: Rep_1093_c_0_280
Type: pfam
Location: 282886 - 283980 (-)

Gene ID: Rep_1093_c_0_281
Type: CAZyme
Location: 283987 - 285090 (-)

Gene ID: Rep_1093_c_0_282
Type: STP
Location: 285080 - 285853 (-)

Gene ID: Rep_1093_c_0_283
Type: pfam
Location: 286253 - 287521 (+)

Gene ID: Rep_1093_c_0_284
Type: CAZyme
Location: 287658 - 288680 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_1093_c_0_277	vegan > omnivore	19.46963	0.00565
Rep_1093_c_0_277	vegetarian > omnivore	20.24630	0.00000
Rep_1093_c_0_278	vegan > omnivore	3.15134	0.00565
Rep_1093_c_0_279	vegan > omnivore	22.74145	0.00565
Rep_1093_c_0_281	vegan > omnivore	21.54212	0.00565
Rep_1093_c_0_284	vegan > omnivore	19.09767	0.00565