Cluster: Rep_1091_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1091
- CGC Family ID: CGCFAM_08928
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1091_c_31 | Rep_1091_c_31_3 | 2918 | 6238 | + | 3.A.5.1.1 |
| pfam | Rep_1091_c_31 | Rep_1091_c_31_4 | 6313 | 8100 | + | tRNA-synt_1d | Arg_tRNA_synt_N | DALR_1 |
| pfam | Rep_1091_c_31 | Rep_1091_c_31_5 | 8176 | 9483 | + | Mur_ligase_C | Mur_ligase_M |
| CAZyme | Rep_1091_c_31 | Rep_1091_c_31_6 | 9563 | 10555 | - | GT2 |
Gene ID: Rep_1091_c_31_3
Type: TC
Location: 2918 - 6238 (+)
Type: TC
Location: 2918 - 6238 (+)
Gene ID: Rep_1091_c_31_4
Type: pfam
Location: 6313 - 8100 (+)
Type: pfam
Location: 6313 - 8100 (+)
Gene ID: Rep_1091_c_31_5
Type: pfam
Location: 8176 - 9483 (+)
Type: pfam
Location: 8176 - 9483 (+)
Gene ID: Rep_1091_c_31_6
Type: CAZyme
Location: 9563 - 10555 (-)
Type: CAZyme
Location: 9563 - 10555 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
CAJPTX01
Genus
Bacteroides_D
Species
Bacteroides_D sp938038735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.