Cluster: Rep_1091_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1091
- CGC Family ID: CGCFAM_05263
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1091_c_22 | Rep_1091_c_22_29 | 28403 | 29518 | + | 3.A.1.132.3 |
| pfam | Rep_1091_c_22 | Rep_1091_c_22_30 | 29571 | 29813 | + | NifU |
| CAZyme | Rep_1091_c_22 | Rep_1091_c_22_31 | 29800 | 30813 | + | GH73 |
Gene ID: Rep_1091_c_22_29
Type: TC
Location: 28403 - 29518 (+)
Type: TC
Location: 28403 - 29518 (+)
Gene ID: Rep_1091_c_22_30
Type: pfam
Location: 29571 - 29813 (+)
Type: pfam
Location: 29571 - 29813 (+)
Gene ID: Rep_1091_c_22_31
Type: CAZyme
Location: 29800 - 30813 (+)
Type: CAZyme
Location: 29800 - 30813 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
CAJPTX01
Genus
Bacteroides_D
Species
Bacteroides_D sp938038735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.