Cluster: Rep_1091_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_1091
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1091_c_138 | Rep_1091_c_138_36 | 42629 | 43804 | - | 3.D.4.3.2 |
| TC | Rep_1091_c_138 | Rep_1091_c_138_37 | 43823 | 45358 | - | 3.D.4.3.2 |
| pfam | Rep_1091_c_138 | Rep_1091_c_138_38 | 45388 | 45675 | - | DUF4492 |
| pfam | Rep_1091_c_138 | Rep_1091_c_138_39 | 46093 | 48966 | - | Aminotran_5 | GDC-P | GDC-P | GcvP2_C |
| CAZyme | Rep_1091_c_138 | Rep_1091_c_138_40 | 49656 | 51785 | + | GH133 |
| CAZyme | Rep_1091_c_138 | Rep_1091_c_138_41 | 51801 | 53072 | + | GT4 |
| CAZyme | Rep_1091_c_138 | Rep_1091_c_138_42 | 53105 | 54289 | + | GH57 |
Gene ID: Rep_1091_c_138_36
Type: TC
Location: 42629 - 43804 (-)
Type: TC
Location: 42629 - 43804 (-)
Gene ID: Rep_1091_c_138_37
Type: TC
Location: 43823 - 45358 (-)
Type: TC
Location: 43823 - 45358 (-)
Gene ID: Rep_1091_c_138_38
Type: pfam
Location: 45388 - 45675 (-)
Type: pfam
Location: 45388 - 45675 (-)
Gene ID: Rep_1091_c_138_39
Type: pfam
Location: 46093 - 48966 (-)
Type: pfam
Location: 46093 - 48966 (-)
Gene ID: Rep_1091_c_138_40
Type: CAZyme
Location: 49656 - 51785 (+)
Type: CAZyme
Location: 49656 - 51785 (+)
Gene ID: Rep_1091_c_138_41
Type: CAZyme
Location: 51801 - 53072 (+)
Type: CAZyme
Location: 51801 - 53072 (+)
Gene ID: Rep_1091_c_138_42
Type: CAZyme
Location: 53105 - 54289 (+)
Type: CAZyme
Location: 53105 - 54289 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
CAJPTX01
Genus
Bacteroides_D
Species
Bacteroides_D sp938038735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.