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Cluster: Rep_1091_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1091_c_96 Rep_1091_c_96_12 10536 11474 - 2.A.124.1.2
pfam Rep_1091_c_96 Rep_1091_c_96_13 11511 12437 - NTP_transferase
pfam Rep_1091_c_96 Rep_1091_c_96_14 12457 13599 - Radical_SAM | CofH_C
TC Rep_1091_c_96 Rep_1091_c_96_15 13671 15974 - 1.B.52.2.1
TC Rep_1091_c_96 Rep_1091_c_96_16 16052 17164 - 3.A.1.105.4
TC Rep_1091_c_96 Rep_1091_c_96_17 17181 18287 - 3.A.1.105.15
TC Rep_1091_c_96 Rep_1091_c_96_18 18297 19076 - 3.A.1.105.15
TC Rep_1091_c_96 Rep_1091_c_96_19 19076 20014 - 3.A.1.105.15
TC Rep_1091_c_96 Rep_1091_c_96_20 20027 20950 - 3.A.1.105.15
pfam Rep_1091_c_96 Rep_1091_c_96_21 20947 22287 - OEP | OEP
CAZyme Rep_1091_c_96 Rep_1091_c_96_22 22287 23036 - CE4
Gene ID: Rep_1091_c_96_12
Type: TC
Location: 10536 - 11474 (-)
Gene ID: Rep_1091_c_96_13
Type: pfam
Location: 11511 - 12437 (-)
Gene ID: Rep_1091_c_96_14
Type: pfam
Location: 12457 - 13599 (-)
Gene ID: Rep_1091_c_96_15
Type: TC
Location: 13671 - 15974 (-)
Gene ID: Rep_1091_c_96_16
Type: TC
Location: 16052 - 17164 (-)
Gene ID: Rep_1091_c_96_17
Type: TC
Location: 17181 - 18287 (-)
Gene ID: Rep_1091_c_96_18
Type: TC
Location: 18297 - 19076 (-)
Gene ID: Rep_1091_c_96_19
Type: TC
Location: 19076 - 20014 (-)
Gene ID: Rep_1091_c_96_20
Type: TC
Location: 20027 - 20950 (-)
Gene ID: Rep_1091_c_96_21
Type: pfam
Location: 20947 - 22287 (-)
Gene ID: Rep_1091_c_96_22
Type: CAZyme
Location: 22287 - 23036 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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