Cluster: Rep_1091_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1091
- CGC Family ID: CGCFAM_00593
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1091_c_2 | Rep_1091_c_2_7 | 7185 | 8744 | + | 1.B.52.2.1 |
| NULL(UNKNOWN) | Rep_1091_c_2 | Rep_1091_c_2_8 | 9101 | 9601 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1091_c_2 | Rep_1091_c_2_9 | 9874 | 10611 | - | GT2 |
| NULL(UNKNOWN) | Rep_1091_c_2 | Rep_1091_c_2_10 | 10608 | 12521 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1091_c_2 | Rep_1091_c_2_11 | 13132 | 13623 | - | Metallophos_2 |
| TC | Rep_1091_c_2 | Rep_1091_c_2_12 | 13672 | 14634 | - | 2.A.4.7.3 |
Gene ID: Rep_1091_c_2_7
Type: TC
Location: 7185 - 8744 (+)
Type: TC
Location: 7185 - 8744 (+)
Gene ID: Rep_1091_c_2_8
Type:
Location: 9101 - 9601 (-)
Type:
Location: 9101 - 9601 (-)
Gene ID: Rep_1091_c_2_9
Type: CAZyme
Location: 9874 - 10611 (-)
Type: CAZyme
Location: 9874 - 10611 (-)
Gene ID: Rep_1091_c_2_10
Type:
Location: 10608 - 12521 (-)
Type:
Location: 10608 - 12521 (-)
Gene ID: Rep_1091_c_2_11
Type: pfam
Location: 13132 - 13623 (-)
Type: pfam
Location: 13132 - 13623 (-)
Gene ID: Rep_1091_c_2_12
Type: TC
Location: 13672 - 14634 (-)
Type: TC
Location: 13672 - 14634 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
CAJPTX01
Genus
Bacteroides_D
Species
Bacteroides_D sp938038735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.