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Cluster: Rep_1089_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1089_c_23 Rep_1089_c_23_1 2 811 - 1.B.12.3.2
TC Rep_1089_c_23 Rep_1089_c_23_2 750 1397 - 1.B.12.3.2
TC Rep_1089_c_23 Rep_1089_c_23_3 1443 2177 - 3.A.25.2.1
pfam Rep_1089_c_23 Rep_1089_c_23_4 2177 2821 - Lactamase_B
CAZyme Rep_1089_c_23 Rep_1089_c_23_5 2811 3845 - GT28
TC Rep_1089_c_23 Rep_1089_c_23_6 3853 5079 - 2.A.27.1.1
Gene ID: Rep_1089_c_23_1
Type: TC
Location: 2 - 811 (-)
Gene ID: Rep_1089_c_23_2
Type: TC
Location: 750 - 1397 (-)
Gene ID: Rep_1089_c_23_3
Type: TC
Location: 1443 - 2177 (-)
Gene ID: Rep_1089_c_23_4
Type: pfam
Location: 2177 - 2821 (-)
Gene ID: Rep_1089_c_23_5
Type: CAZyme
Location: 2811 - 3845 (-)
Gene ID: Rep_1089_c_23_6
Type: TC
Location: 3853 - 5079 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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