Cluster: Rep_1089_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1089
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1089_c_21 | Rep_1089_c_21_15 | 10212 | 10874 | - | 3.A.1.8.2 |
| STP | Rep_1089_c_21 | Rep_1089_c_21_16 | 10875 | 11594 | - | SBP_bac_1 |
| STP | Rep_1089_c_21 | Rep_1089_c_21_17 | 11594 | 13033 | - | PALP |
| CAZyme | Rep_1089_c_21 | Rep_1089_c_21_18 | 13091 | 14188 | + | GT11 |
Gene ID: Rep_1089_c_21_15
Type: TC
Location: 10212 - 10874 (-)
Type: TC
Location: 10212 - 10874 (-)
Gene ID: Rep_1089_c_21_16
Type: STP
Location: 10875 - 11594 (-)
Type: STP
Location: 10875 - 11594 (-)
Gene ID: Rep_1089_c_21_17
Type: STP
Location: 11594 - 13033 (-)
Type: STP
Location: 11594 - 13033 (-)
Gene ID: Rep_1089_c_21_18
Type: CAZyme
Location: 13091 - 14188 (+)
Type: CAZyme
Location: 13091 - 14188 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
HGM08974
Species
HGM08974 sp900766555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.