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Cluster: Rep_1089_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_1089_c_42 Rep_1089_c_42_11 10069 11574 + 2.A.20.2.9
TC Rep_1089_c_42 Rep_1089_c_42_12 11599 12915 + 9.A.40.2.2
pfam Rep_1089_c_42 Rep_1089_c_42_13 12965 13546 + YceI
TC Rep_1089_c_42 Rep_1089_c_42_14 13595 15019 + 2.A.102.4.10
NULL(UNKNOWN) Rep_1089_c_42 Rep_1089_c_42_15 15120 15290 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_1089_c_42 Rep_1089_c_42_16 15328 16461 + GT2
peptidase Rep_1089_c_42 Rep_1089_c_42_17 16453 18273 - S15.UNW
TC Rep_1089_c_42 Rep_1089_c_42_18 18282 19691 - 2.A.118.1.4
Gene ID: Rep_1089_c_42_11
Type: TC
Location: 10069 - 11574 (+)
Gene ID: Rep_1089_c_42_12
Type: TC
Location: 11599 - 12915 (+)
Gene ID: Rep_1089_c_42_13
Type: pfam
Location: 12965 - 13546 (+)
Gene ID: Rep_1089_c_42_14
Type: TC
Location: 13595 - 15019 (+)
Gene ID: Rep_1089_c_42_15
Type:
Location: 15120 - 15290 (+)
Gene ID: Rep_1089_c_42_16
Type: CAZyme
Location: 15328 - 16461 (+)
Gene ID: Rep_1089_c_42_17
Type: peptidase
Location: 16453 - 18273 (-)
Gene ID: Rep_1089_c_42_18
Type: TC
Location: 18282 - 19691 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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