Cluster: Rep_1087_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1087
- CGC Family ID: CGCFAM_00629
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1087_c_44 | Rep_1087_c_44_6 | 4526 | 7717 | - | 2.A.6.3.6 |
| pfam | Rep_1087_c_44 | Rep_1087_c_44_7 | 7714 | 8868 | - | HlyD_3 | Biotin_lipoyl_2 | HlyD_D23 |
| CAZyme | Rep_1087_c_44 | Rep_1087_c_44_8 | 8961 | 10817 | + | GT66 |
Gene ID: Rep_1087_c_44_6
Type: TC
Location: 4526 - 7717 (-)
Type: TC
Location: 4526 - 7717 (-)
Gene ID: Rep_1087_c_44_7
Type: pfam
Location: 7714 - 8868 (-)
Type: pfam
Location: 7714 - 8868 (-)
Gene ID: Rep_1087_c_44_8
Type: CAZyme
Location: 8961 - 10817 (+)
Type: CAZyme
Location: 8961 - 10817 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_D
Species
Helicobacter_D winghamensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.