Cluster: Rep_1087_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1087
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1087_c_27 | Rep_1087_c_27_10 | 11999 | 12472 | + | 3.D.1.8.1 |
| pfam | Rep_1087_c_27 | Rep_1087_c_27_11 | 12480 | 13037 | + | VTT_dom |
| CAZyme | Rep_1087_c_27 | Rep_1087_c_27_12 | 13010 | 14272 | + | GT82 |
Gene ID: Rep_1087_c_27_10
Type: TC
Location: 11999 - 12472 (+)
Type: TC
Location: 11999 - 12472 (+)
Gene ID: Rep_1087_c_27_11
Type: pfam
Location: 12480 - 13037 (+)
Type: pfam
Location: 12480 - 13037 (+)
Gene ID: Rep_1087_c_27_12
Type: CAZyme
Location: 13010 - 14272 (+)
Type: CAZyme
Location: 13010 - 14272 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_D
Species
Helicobacter_D winghamensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.