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Cluster: Rep_1087_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1087_c_6 Rep_1087_c_6_10 10487 12520 + GT107 | GT107
TC Rep_1087_c_6 Rep_1087_c_6_11 12486 13649 + 9.A.41.1.3
NULL(UNKNOWN) Rep_1087_c_6 Rep_1087_c_6_12 13695 14096 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_1087_c_6 Rep_1087_c_6_13 14180 14833 - 5.A.2.1.2
peptidase Rep_1087_c_6 Rep_1087_c_6_14 14958 15500 + S85.UNW
pfam Rep_1087_c_6 Rep_1087_c_6_15 15690 16805 + ANF_receptor | Peripla_BP_5 | Peripla_BP_6
TC Rep_1087_c_6 Rep_1087_c_6_16 16829 17728 + 3.A.1.4.10
TC Rep_1087_c_6 Rep_1087_c_6_17 17735 18922 + 3.A.1.4.1
TC Rep_1087_c_6 Rep_1087_c_6_18 18922 19695 + 3.A.1.4.10
TC Rep_1087_c_6 Rep_1087_c_6_19 19682 20377 + 3.A.1.4.10
Gene ID: Rep_1087_c_6_10
Type: CAZyme
Location: 10487 - 12520 (+)
Gene ID: Rep_1087_c_6_11
Type: TC
Location: 12486 - 13649 (+)
Gene ID: Rep_1087_c_6_12
Type:
Location: 13695 - 14096 (-)
Gene ID: Rep_1087_c_6_13
Type: TC
Location: 14180 - 14833 (-)
Gene ID: Rep_1087_c_6_14
Type: peptidase
Location: 14958 - 15500 (+)
Gene ID: Rep_1087_c_6_15
Type: pfam
Location: 15690 - 16805 (+)
Gene ID: Rep_1087_c_6_16
Type: TC
Location: 16829 - 17728 (+)
Gene ID: Rep_1087_c_6_17
Type: TC
Location: 17735 - 18922 (+)
Gene ID: Rep_1087_c_6_18
Type: TC
Location: 18922 - 19695 (+)
Gene ID: Rep_1087_c_6_19
Type: TC
Location: 19682 - 20377 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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