Cluster: Rep_1087_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1087
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1087_c_3 | Rep_1087_c_3_32 | 29942 | 31168 | + | 2.A.36.6.4 |
| pfam | Rep_1087_c_3 | Rep_1087_c_3_33 | 31398 | 32033 | - | PseudoU_synth_2 |
| CAZyme | Rep_1087_c_3 | Rep_1087_c_3_34 | 32033 | 33259 | - | GT30 |
Gene ID: Rep_1087_c_3_32
Type: TC
Location: 29942 - 31168 (+)
Type: TC
Location: 29942 - 31168 (+)
Gene ID: Rep_1087_c_3_33
Type: pfam
Location: 31398 - 32033 (-)
Type: pfam
Location: 31398 - 32033 (-)
Gene ID: Rep_1087_c_3_34
Type: CAZyme
Location: 32033 - 33259 (-)
Type: CAZyme
Location: 32033 - 33259 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_D
Species
Helicobacter_D winghamensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.