Cluster: Rep_1086_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1086
- CGC Family ID: CGCFAM_00104
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1086_c_44 | Rep_1086_c_44_2 | 454 | 1329 | + | 2.A.7.3.65 |
| CAZyme | Rep_1086_c_44 | Rep_1086_c_44_3 | 1309 | 2376 | - | GT4 |
| TC | Rep_1086_c_44 | Rep_1086_c_44_4 | 2360 | 4171 | - | 9.B.18.2.1 |
Gene ID: Rep_1086_c_44_2
Type: TC
Location: 454 - 1329 (+)
Type: TC
Location: 454 - 1329 (+)
Gene ID: Rep_1086_c_44_3
Type: CAZyme
Location: 1309 - 2376 (-)
Type: CAZyme
Location: 1309 - 2376 (-)
Gene ID: Rep_1086_c_44_4
Type: TC
Location: 2360 - 4171 (-)
Type: TC
Location: 2360 - 4171 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_D
Species
Helicobacter_D pullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.