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Cluster: Rep_1086_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_1086_c_35 Rep_1086_c_35_1 1 1272 + GT107
pfam Rep_1086_c_35 Rep_1086_c_35_2 1258 2361 - PLA1
TC Rep_1086_c_35 Rep_1086_c_35_3 2471 3235 + 3.A.1.101.1
TC Rep_1086_c_35 Rep_1086_c_35_4 3232 3891 + 3.A.1.101.1
TC Rep_1086_c_35 Rep_1086_c_35_5 3892 5019 + 8.A.4.1.1
TC Rep_1086_c_35 Rep_1086_c_35_6 5019 6743 + 1.B.18.1.2
TC Rep_1086_c_35 Rep_1086_c_35_7 6747 8003 + 9.A.41.1.3
Gene ID: Rep_1086_c_35_1
Type: CAZyme
Location: 1 - 1272 (+)
Gene ID: Rep_1086_c_35_2
Type: pfam
Location: 1258 - 2361 (-)
Gene ID: Rep_1086_c_35_3
Type: TC
Location: 2471 - 3235 (+)
Gene ID: Rep_1086_c_35_4
Type: TC
Location: 3232 - 3891 (+)
Gene ID: Rep_1086_c_35_5
Type: TC
Location: 3892 - 5019 (+)
Gene ID: Rep_1086_c_35_6
Type: TC
Location: 5019 - 6743 (+)
Gene ID: Rep_1086_c_35_7
Type: TC
Location: 6747 - 8003 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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