Cluster: Rep_1086_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1086
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1086_c_31 | Rep_1086_c_31_3 | 1248 | 3182 | + | GT51 |
| TC | Rep_1086_c_31 | Rep_1086_c_31_4 | 3182 | 4885 | + | 3.A.1.106.1 |
| STP | Rep_1086_c_31 | Rep_1086_c_31_5 | 4944 | 5903 | + | CheW | Response_reg |
| TC | Rep_1086_c_31 | Rep_1086_c_31_6 | 6098 | 8884 | + | 5.A.3.3.2 |
Gene ID: Rep_1086_c_31_3
Type: CAZyme
Location: 1248 - 3182 (+)
Type: CAZyme
Location: 1248 - 3182 (+)
Gene ID: Rep_1086_c_31_4
Type: TC
Location: 3182 - 4885 (+)
Type: TC
Location: 3182 - 4885 (+)
Gene ID: Rep_1086_c_31_5
Type: STP
Location: 4944 - 5903 (+)
Type: STP
Location: 4944 - 5903 (+)
Gene ID: Rep_1086_c_31_6
Type: TC
Location: 6098 - 8884 (+)
Type: TC
Location: 6098 - 8884 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_D
Species
Helicobacter_D pullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.