Cluster: Rep_1085_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1085
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1085_c_104 | Rep_1085_c_104_1 | 71 | 1672 | - | 2.A.13.1.2 |
| TC | Rep_1085_c_104 | Rep_1085_c_104_2 | 1901 | 2638 | + | 5.A.1.2.1 |
| peptidase | Rep_1085_c_104 | Rep_1085_c_104_3 | 2656 | 3900 | + | M38.UNW |
| NULL(UNKNOWN) | Rep_1085_c_104 | Rep_1085_c_104_4 | 3922 | 4152 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_1085_c_104 | Rep_1085_c_104_5 | 4161 | 4994 | + | GT11 |
Gene ID: Rep_1085_c_104_1
Type: TC
Location: 71 - 1672 (-)
Type: TC
Location: 71 - 1672 (-)
Gene ID: Rep_1085_c_104_2
Type: TC
Location: 1901 - 2638 (+)
Type: TC
Location: 1901 - 2638 (+)
Gene ID: Rep_1085_c_104_3
Type: peptidase
Location: 2656 - 3900 (+)
Type: peptidase
Location: 2656 - 3900 (+)
Gene ID: Rep_1085_c_104_4
Type:
Location: 3922 - 4152 (+)
Type:
Location: 3922 - 4152 (+)
Gene ID: Rep_1085_c_104_5
Type: CAZyme
Location: 4161 - 4994 (+)
Type: CAZyme
Location: 4161 - 4994 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_B
Species
Helicobacter_B canis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.