Cluster: Rep_1085_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1085
- CGC Family ID: CGCFAM_00002
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1085_c_60 | Rep_1085_c_60_1 | 2 | 790 | - | GT8 |
| NULL(UNKNOWN) | Rep_1085_c_60 | Rep_1085_c_60_2 | 777 | 1526 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_1085_c_60 | Rep_1085_c_60_3 | 1526 | 2707 | - | EpsG |
| CAZyme | Rep_1085_c_60 | Rep_1085_c_60_4 | 2906 | 3511 | - | GT2 |
| TC | Rep_1085_c_60 | Rep_1085_c_60_5 | 3590 | 5389 | - | 2.A.58.2.4 |
Gene ID: Rep_1085_c_60_1
Type: CAZyme
Location: 2 - 790 (-)
Type: CAZyme
Location: 2 - 790 (-)
Gene ID: Rep_1085_c_60_2
Type:
Location: 777 - 1526 (-)
Type:
Location: 777 - 1526 (-)
Gene ID: Rep_1085_c_60_3
Type: pfam
Location: 1526 - 2707 (-)
Type: pfam
Location: 1526 - 2707 (-)
Gene ID: Rep_1085_c_60_4
Type: CAZyme
Location: 2906 - 3511 (-)
Type: CAZyme
Location: 2906 - 3511 (-)
Gene ID: Rep_1085_c_60_5
Type: TC
Location: 3590 - 5389 (-)
Type: TC
Location: 3590 - 5389 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_B
Species
Helicobacter_B canis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.