Cluster: Rep_1085_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1085
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1085_c_53 | Rep_1085_c_53_28 | 25202 | 26503 | - | 3.A.6.1.1 |
| pfam | Rep_1085_c_53 | Rep_1085_c_53_29 | 26669 | 27304 | - | Sod_Fe_N | Sod_Fe_C |
| pfam | Rep_1085_c_53 | Rep_1085_c_53_30 | 27488 | 28684 | + | MFS_1 | MFS_1 |
| CAZyme | Rep_1085_c_53 | Rep_1085_c_53_31 | 29138 | 30310 | + | GT9 |
Gene ID: Rep_1085_c_53_28
Type: TC
Location: 25202 - 26503 (-)
Type: TC
Location: 25202 - 26503 (-)
Gene ID: Rep_1085_c_53_29
Type: pfam
Location: 26669 - 27304 (-)
Type: pfam
Location: 26669 - 27304 (-)
Gene ID: Rep_1085_c_53_30
Type: pfam
Location: 27488 - 28684 (+)
Type: pfam
Location: 27488 - 28684 (+)
Gene ID: Rep_1085_c_53_31
Type: CAZyme
Location: 29138 - 30310 (+)
Type: CAZyme
Location: 29138 - 30310 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_B
Species
Helicobacter_B canis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.