Cluster: Rep_1085_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1085
- CGC Family ID: CGCFAM_00235
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1085_c_18 | Rep_1085_c_18_4 | 2832 | 4643 | - | 3.A.7.19.1 |
| CAZyme | Rep_1085_c_18 | Rep_1085_c_18_5 | 4643 | 5740 | - | GT2 |
| TC | Rep_1085_c_18 | Rep_1085_c_18_6 | 5832 | 7157 | - | 2.A.86.2.2 |
Gene ID: Rep_1085_c_18_4
Type: TC
Location: 2832 - 4643 (-)
Type: TC
Location: 2832 - 4643 (-)
Gene ID: Rep_1085_c_18_5
Type: CAZyme
Location: 4643 - 5740 (-)
Type: CAZyme
Location: 4643 - 5740 (-)
Gene ID: Rep_1085_c_18_6
Type: TC
Location: 5832 - 7157 (-)
Type: TC
Location: 5832 - 7157 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_B
Species
Helicobacter_B canis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.