Cluster: Rep_1085_CGC10
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_1085
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1085_c_112 | Rep_1085_c_112_6 | 3039 | 4976 | - | GT51 |
| TC | Rep_1085_c_112 | Rep_1085_c_112_7 | 5015 | 6385 | - | 1.B.52.2.1 |
| TF | Rep_1085_c_112 | Rep_1085_c_112_8 | 6524 | 6982 | + | FUR |
| pfam | Rep_1085_c_112 | Rep_1085_c_112_9 | 7000 | 7602 | + | PAP2 |
| CAZyme | Rep_1085_c_112 | Rep_1085_c_112_10 | 7603 | 8859 | - | GT2 |
Gene ID: Rep_1085_c_112_6
Type: CAZyme
Location: 3039 - 4976 (-)
Type: CAZyme
Location: 3039 - 4976 (-)
Gene ID: Rep_1085_c_112_7
Type: TC
Location: 5015 - 6385 (-)
Type: TC
Location: 5015 - 6385 (-)
Gene ID: Rep_1085_c_112_8
Type: TF
Location: 6524 - 6982 (+)
Type: TF
Location: 6524 - 6982 (+)
Gene ID: Rep_1085_c_112_9
Type: pfam
Location: 7000 - 7602 (+)
Type: pfam
Location: 7000 - 7602 (+)
Gene ID: Rep_1085_c_112_10
Type: CAZyme
Location: 7603 - 8859 (-)
Type: CAZyme
Location: 7603 - 8859 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Helicobacteraceae
Genus
Helicobacter_B
Species
Helicobacter_B canis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.