Cluster: Rep_1080_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1080
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1080_c_39 | Rep_1080_c_39_6 | 2254 | 3594 | - | 3.A.5.1.1 |
| pfam | Rep_1080_c_39 | Rep_1080_c_39_7 | 3657 | 4415 | - | PseudoU_synth_2 |
| CAZyme | Rep_1080_c_39 | Rep_1080_c_39_8 | 4412 | 5548 | - | GT30 |
Gene ID: Rep_1080_c_39_6
Type: TC
Location: 2254 - 3594 (-)
Type: TC
Location: 2254 - 3594 (-)
Gene ID: Rep_1080_c_39_7
Type: pfam
Location: 3657 - 4415 (-)
Type: pfam
Location: 3657 - 4415 (-)
Gene ID: Rep_1080_c_39_8
Type: CAZyme
Location: 4412 - 5548 (-)
Type: CAZyme
Location: 4412 - 5548 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_A
Species
Campylobacter_A concisus_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.