Cluster: Rep_1080_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1080
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1080_c_22 | Rep_1080_c_22_4 | 2925 | 3332 | - | 1.A.22.1.1 |
| pfam | Rep_1080_c_22 | Rep_1080_c_22_5 | 3479 | 4774 | + | tRNA-synt_1c | Anticodon_2 |
| pfam | Rep_1080_c_22 | Rep_1080_c_22_6 | 4783 | 5076 | + | YGGT |
| CAZyme | Rep_1080_c_22 | Rep_1080_c_22_7 | 5054 | 6691 | + | GH23 |
Gene ID: Rep_1080_c_22_4
Type: TC
Location: 2925 - 3332 (-)
Type: TC
Location: 2925 - 3332 (-)
Gene ID: Rep_1080_c_22_5
Type: pfam
Location: 3479 - 4774 (+)
Type: pfam
Location: 3479 - 4774 (+)
Gene ID: Rep_1080_c_22_6
Type: pfam
Location: 4783 - 5076 (+)
Type: pfam
Location: 4783 - 5076 (+)
Gene ID: Rep_1080_c_22_7
Type: CAZyme
Location: 5054 - 6691 (+)
Type: CAZyme
Location: 5054 - 6691 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_A
Species
Campylobacter_A concisus_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.