Cluster: Rep_1080_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1080
- CGC Family ID: CGCFAM_00005
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_1080_c_20 | Rep_1080_c_20_29 | 31225 | 32208 | - | 2.A.98.1.3 |
| TC | Rep_1080_c_20 | Rep_1080_c_20_30 | 32312 | 33247 | + | 9.B.18.1.3 |
| CAZyme | Rep_1080_c_20 | Rep_1080_c_20_31 | 33248 | 33823 | - | GT4 |
Gene ID: Rep_1080_c_20_29
Type: TC
Location: 31225 - 32208 (-)
Type: TC
Location: 31225 - 32208 (-)
Gene ID: Rep_1080_c_20_30
Type: TC
Location: 32312 - 33247 (+)
Type: TC
Location: 32312 - 33247 (+)
Gene ID: Rep_1080_c_20_31
Type: CAZyme
Location: 33248 - 33823 (-)
Type: CAZyme
Location: 33248 - 33823 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_A
Species
Campylobacter_A concisus_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.