Cluster: Rep_1080_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_1080
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_1080_c_12 | Rep_1080_c_12_18 | 19198 | 20082 | - | CE11 |
| STP | Rep_1080_c_12 | Rep_1080_c_12_19 | 20143 | 21513 | - | Peptidase_M23 |
| pfam | Rep_1080_c_12 | Rep_1080_c_12_20 | 21575 | 22405 | - | PDH_N | NAD_binding_2 | F420_oxidored | KARI_N | PDH_C |
| TC | Rep_1080_c_12 | Rep_1080_c_12_21 | 22495 | 24750 | + | 1.B.33.1.1 |
Gene ID: Rep_1080_c_12_18
Type: CAZyme
Location: 19198 - 20082 (-)
Type: CAZyme
Location: 19198 - 20082 (-)
Gene ID: Rep_1080_c_12_19
Type: STP
Location: 20143 - 21513 (-)
Type: STP
Location: 20143 - 21513 (-)
Gene ID: Rep_1080_c_12_20
Type: pfam
Location: 21575 - 22405 (-)
Type: pfam
Location: 21575 - 22405 (-)
Gene ID: Rep_1080_c_12_21
Type: TC
Location: 22495 - 24750 (+)
Type: TC
Location: 22495 - 24750 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Campylobacterota
Class
Campylobacteria
Order
Campylobacterales
Family
Campylobacteraceae
Genus
Campylobacter_A
Species
Campylobacter_A concisus_C
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.