dbCAN Logo

Cluster: Rep_107_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_107_c_24 Rep_107_c_24_7 6943 7524 - 3.D.6.1.2
TC Rep_107_c_24 Rep_107_c_24_8 7589 8179 - 3.D.6.1.2
TC Rep_107_c_24 Rep_107_c_24_9 8189 9337 - 3.D.6.1.3
TC Rep_107_c_24 Rep_107_c_24_10 9334 10323 - 3.D.6.1.2
TC Rep_107_c_24 Rep_107_c_24_11 10376 11728 - 3.D.6.1.2
TC Rep_107_c_24 Rep_107_c_24_12 11737 12672 - 3.D.6.1.2
pfam Rep_107_c_24 Rep_107_c_24_13 12689 13111 - RseC_MucC
STP Rep_107_c_24 Rep_107_c_24_14 13240 14268 - Aminotran_1_2
CAZyme Rep_107_c_24 Rep_107_c_24_15 14297 15613 - GH3
Gene ID: Rep_107_c_24_7
Type: TC
Location: 6943 - 7524 (-)
Gene ID: Rep_107_c_24_8
Type: TC
Location: 7589 - 8179 (-)
Gene ID: Rep_107_c_24_9
Type: TC
Location: 8189 - 9337 (-)
Gene ID: Rep_107_c_24_10
Type: TC
Location: 9334 - 10323 (-)
Gene ID: Rep_107_c_24_11
Type: TC
Location: 10376 - 11728 (-)
Gene ID: Rep_107_c_24_12
Type: TC
Location: 11737 - 12672 (-)
Gene ID: Rep_107_c_24_13
Type: pfam
Location: 12689 - 13111 (-)
Gene ID: Rep_107_c_24_14
Type: STP
Location: 13240 - 14268 (-)
Gene ID: Rep_107_c_24_15
Type: CAZyme
Location: 14297 - 15613 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List