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Cluster: Rep_107_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_107_c_21 Rep_107_c_21_19 26700 27716 - 8.A.21.2.2
pfam Rep_107_c_21 Rep_107_c_21_20 27738 28193 - NfeD
pfam Rep_107_c_21 Rep_107_c_21_21 28209 28694 - GSHPx
TC Rep_107_c_21 Rep_107_c_21_22 28719 29174 + 2.A.7.34.3
CAZyme Rep_107_c_21 Rep_107_c_21_23 29180 30199 - GT27
pfam Rep_107_c_21 Rep_107_c_21_24 30208 31557 - UPF0004 | Radical_SAM
TC Rep_107_c_21 Rep_107_c_21_25 31554 32156 - 2.A.51.1.6
TC Rep_107_c_21 Rep_107_c_21_26 32169 32699 - 2.A.51.1.6
Gene ID: Rep_107_c_21_19
Type: TC
Location: 26700 - 27716 (-)
Gene ID: Rep_107_c_21_20
Type: pfam
Location: 27738 - 28193 (-)
Gene ID: Rep_107_c_21_21
Type: pfam
Location: 28209 - 28694 (-)
Gene ID: Rep_107_c_21_22
Type: TC
Location: 28719 - 29174 (+)
Gene ID: Rep_107_c_21_23
Type: CAZyme
Location: 29180 - 30199 (-)
Gene ID: Rep_107_c_21_24
Type: pfam
Location: 30208 - 31557 (-)
Gene ID: Rep_107_c_21_25
Type: TC
Location: 31554 - 32156 (-)
Gene ID: Rep_107_c_21_26
Type: TC
Location: 32169 - 32699 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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